Accepted/In Press/Published
- Graham AM et al (2023). Rapid reduction of Paraoxonase expression followed by inactivation across semiaquatic mammals suggests adaptive benefit of gene loss. Molecular Biology and Evolution.
- Lucas S, AM Graham, JS Presnell and N Clark (2023). Highly Dynamic Gene Family Evolution suggests changing roles for PON genes within Metazoa. Genome Biology and Evolution
- Graham AM, FS Barreto. Parasitic cnidarians (Myxozoa) do not retain key genomic oxygen-sensing and homeostasis tool-kit genes. Genome Biology and Evolution
- Graham AM , J Peters, RE Wilson, V Muñoz-Fuentes, AJ Green, D Dorfsman, K Winker and KG McCracken. (2021) Adaptive introgression of beta globin in two Andean waterfowl. Heredity [Awarded Best Student Paper in Heredity 2021]
- Graham AM and FS Barreto (2020). Independent losses of the Hypoxia-Inducible Factor (HIF) Pathway within Crustacea. Molecular Biology and Evolution.
- Graham AM and FS Barreto (2019). Loss of the HIF pathway in a widely distributed intertidal crustacean, the copepod Tigriopus californicus. Proceedings of the National Academy of Sciences (PNAS)
- Graham AM and FS Barreto (2019). Novel miRNAs are associated with an adaptive transcriptional response to temperature stress in the intertidal copepod, Tigriopus californicus. Molecular Ecology.
- Graham AM and KG McCracken (2019). Convergent evolution on the hypoxia-inducible factor (HIF) pathway genes EGLN1 and EPAS1 in high-altitude ducks. Heredity.
- Graham AM, P Lavretsky, V. Muñoz-Fuentes, AJ Green, RE Wilson, and KG McCracken (2018). A migration-selection balance drives genetic variation responsible for the adaptation to high-altitude environments in the Speckled Teal (Anas flavirostris). Genome Biology and Evolution
- Graham AM and JS Presnell (2017) Hypoxia Inducible Factor (HIF) transcription factor family expansion, diversification, divergence and selection in eukaryotes. PLOS One.
- Graham AM, JD Merrill, SE McGaugh, and MAF Noor (2012) Geographic selection in the small heat shock gene complex differentiating population of Drosophila pseudoobscura. Journal of Heredity.
- Graham AM, Munday M, Kaftanglu O, Page RE, Amdam GV, and Rueppell O (2011) Support for the Reproductive Ground Plan Hypothesis of Social Evolution and Major QTL for Worker Ovary Size, Ovary Asymmetry and Ovary Activation in Honey Bee
(Apis mellifera L.) BMC Evolutionary Biology. - Stanley A, Graham AM, Wagner R, Morton E, and Schug MD (2011) Characterization of 10 polymorphic microsatellite markers for the Eastern Purple Martins, Progne subis. Conservation Genetics Resources.
In Review/In Revision
- Graham AM, P Lavretsky, RE Wilson, and KG McCracken. High altitude adaptation is accompanied by strong signatures of purifying selection in the mitochondrial genomes of three Andean Waterfowl. Accepted at PLOS One

ORCID publication records: orcid.org/0000-0001-7404-168X
as of Jun 2023 - citations = 243, h-index = 8, i10-index = 8
as of Jun 2023 - citations = 243, h-index = 8, i10-index = 8